Scatterplot of fold changes.

Source: R/plot-fc.R

A simple function that plots the fold change in mRNA and RPF. Different classes of genes are labeled with different of color. Each dot, representing a particular gene, are color coded by the category of expression change.

plotFCs(object, ...)

# S4 method for xtail
plotFCs(object, log2FC.cutoff = 1, xlim = NULL, ylim = NULL)

Arguments

object

a xtail object
...

optional arguments. Currently not used
log2FC.cutoff

cutoff for categorizing results
xlim

argument for limiting the range plotted on the x axis. See scale_continuous for more details.
ylim

argument for limiting the range plotted on the y axis. See scale_continuous for more details.

Value

a ggplot object

Examples

data(xtailres)
plotFCs(xtailres)