The tRNA package allows feature information of tRNAs to be
accessed and list of tRNA to be subset based on these features. The main
purpose is to unify overlapping functions from the tRNAscanImport and
tRNAdbImport packages. The functionality is currently under development and
may change. The package expects a GRanges object with certain columns as
input. The following columns are a requirement: tRNA_length,
tRNA_type, tRNA_anticodon, tRNA_seq, tRNA_str,
tRNA_CCA.end. Outputs of tRNAscanImport and tRNAdbImport meet these
requirements.
Have a look at the vignette for an overview of the functionality. Additional functions are planned to be added in the future.
Useful links:
Report bugs at https://github.com/FelixErnst/tRNA/issues