The SequenceDataSet class

The SequenceDataSet class is used to hold SequenceData objects as its elements. It is derived from the List class.

The SequenceDataSet is used to hold different data types from the of same aligned reads. The same dataset can be used to generate multiple sets of data types. Bam files, annotation and sequence data must be the same for all elements.

SequenceDataSet(...)

Arguments

...

The elements to be included in the SequenceDataSet.

Value

a SequenceDataSet

Examples

data(psd,package="RNAmodR")
data(e5sd,package="RNAmodR")
sdl <- SequenceDataSet(psd,e5sd)