Example data in the RNAmodR package

Source: R/RNAmodR.R

The following datasets are contained in the RNAmodR package. They are used in the man page examples.

data(msi)

data(sds)

data(sdl)

data(psd)

data(e5sd)

data(e3sd)

data(esd)

data(csd)

data(ne3sd)

data(ne5sd)

data(pesd)

Format

  • msi a ModSetInosine instance

  • sds a SequenceDataSet instance

  • sdl a SequenceDataList instance

  • psd a PileupSequenceData instance

  • e5sd a End5SequenceData instance

  • e3sd a End3SequenceData instance

  • esd a EndSequenceData instance

  • csd a CoverageSequenceData instance

  • ne3sd a NormEnd3SequenceData instance

  • ne5sd a NormEnd5SequenceData instance

  • pesd a ProtectedEndSequenceData instance

An object of class SequenceDataSet of length 2.

An object of class SequenceDataList of length 3.

An object of class PileupSequenceData of dimension 100 x 101 x 15 x 15.

An object of class End5SequenceData of dimension 100 x 101 x 3 x 3.

An object of class End3SequenceData of dimension 100 x 101 x 3 x 3.

An object of class EndSequenceData of dimension 100 x 101 x 3 x 3.

An object of class CoverageSequenceData of dimension 100 x 101 x 3 x 3.

An object of class NormEnd3SequenceData of dimension 100 x 101 x 9 x 9.

An object of class NormEnd5SequenceData of dimension 100 x 101 x 9 x 9.

An object of class ProtectedEndSequenceData of dimension 100 x 101 x 3 x 3.